An algorithm-directed two-component library synthesized via solid-phase methodology yielding potent and orally bioavailable p38 MAP kinase inhibitors

J Med Chem. 2002 May 23;45(11):2173-84. doi: 10.1021/jm011132l.

Abstract

Previously we reported the identification of RPR200765A, a potent orally bioavailable pyridine-imidazole inhibitor of p38 mitogen-activated protein (MAP) kinase which suppressed paw swelling and joint pathology in streptococcal cell wall-induced arthritis. Herein, we report the use of solid-phase combinatorial organic synthesis for the parallel processing of a related pyrimidine-imidazole-based library with two points of structural variability. We report also that the application of a computer algorithm, the Monte Carlo Monomer Selection, maximized both the combinatorial synthetic efficiency and the bioavailability of the final compounds. In conjunction with the synthetic protocols, the polymer-supported quench technique was applied to the purification of the final compounds. Through rapid evaluation of the library using a p38 kinase assay and permeability assays, it was possible to identify a number of potent and orally bioavailable p38 MAP kinase inhibitors suitable for further biological investigation.

MeSH terms

  • Administration, Oral
  • Algorithms
  • Animals
  • Anti-Inflammatory Agents, Non-Steroidal / chemical synthesis*
  • Anti-Inflammatory Agents, Non-Steroidal / pharmacokinetics
  • Anti-Inflammatory Agents, Non-Steroidal / pharmacology
  • Arthritis, Experimental / blood
  • Arthritis, Experimental / drug therapy
  • Biological Availability
  • Caco-2 Cells
  • Cell Line
  • Combinatorial Chemistry Techniques
  • Dioxanes / chemical synthesis*
  • Dioxanes / pharmacokinetics
  • Dioxanes / pharmacology
  • Enzyme Inhibitors / chemical synthesis*
  • Enzyme Inhibitors / pharmacokinetics
  • Enzyme Inhibitors / pharmacology
  • Humans
  • Imidazoles / chemical synthesis*
  • Imidazoles / chemistry
  • Imidazoles / pharmacokinetics
  • Mice
  • Mice, Inbred BALB C
  • Mitogen-Activated Protein Kinases / antagonists & inhibitors*
  • Monocytes / metabolism
  • Monte Carlo Method
  • Piperazines / chemical synthesis*
  • Piperazines / pharmacokinetics
  • Piperazines / pharmacology
  • Pyrimidines / chemical synthesis*
  • Pyrimidines / pharmacokinetics
  • Pyrimidines / pharmacology
  • Rats
  • Rats, Inbred Lew
  • Structure-Activity Relationship
  • Tumor Necrosis Factor-alpha / metabolism
  • p38 Mitogen-Activated Protein Kinases

Substances

  • 2-(4-(4-fluorophenyl)-5-(2-(3-cyclopropylmethyl)pyrimidin-4-yl)-1H-imidazol-2-yl)-5-methyl-(1,3)dioxane-5-carboxylic acid 4-methylpiperazinamide
  • Anti-Inflammatory Agents, Non-Steroidal
  • Dioxanes
  • Enzyme Inhibitors
  • Imidazoles
  • Piperazines
  • Pyrimidines
  • Tumor Necrosis Factor-alpha
  • Mitogen-Activated Protein Kinases
  • p38 Mitogen-Activated Protein Kinases